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Welcome to the GenomeView manual. These pages aim to answer any questions you may have as an end-user, a platform-user or as a contributing developer.
== Headline text ==
 
  
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This documentation is open for anyone to contribute to, just click the edit-button near the top and you can help make this a better resource for everyone. Due to increasing vandalism we were forced to shutdown anonymous editing and account sign-up. '''If you like an account, please drop a note to support@genomeview.org'''.
  
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Feel free to copy documentation from the old manual to here, there are still some pages that need to be transferred and we're happy with any help you can spare.
  
== Test ==
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== [[Quick start|Getting started with GenomeView in 5 minutes]] ==
  
 
<div style="float:left;width:49%">
 
<div style="float:left;width:49%">
{{Box-header|title=Title}}
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{{Box-header|title=User manual}}
BOX-CONTENT-TEXT
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These manual pages describe how to use GenomeView and how to prepare your data to be usable in GenomeView.
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[[Starting GenomeView]]
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[[Preparing and loading data]] -- [[Preloaded data]]
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[[Navigation]] -- [[Keyboard short-cuts]]
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[[Visualizations]]
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[[Search for...]]
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[[Manipulating and configuring the views]]
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[[Editing annotations]]
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[[Exporting data and saving changes]]
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[[More functionality with plugins]]
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</div>
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</div>
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<div style="float:right;width:49%">
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{{Box-header|title=Getting help}}
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[[Frequently asked questions]]
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[[I have a problem, help me, please]]
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[[Report a bug or request a feature]]
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[[Supported versions]]
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</div>
 
</div>
 
</div>
 
</div>
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<div style="clear:both;"></div>
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<div style="float:left;width:49%">
 
<div style="float:left;width:49%">
{{Box-header|title=Title}}
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{{Box-header|title=Platform-user manual}}
BOX-CONTENT-TEXT
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These manual pages describe how to integrate GenomeView with your web-based platform or how to communicate with GenomeView from 3-rd party software.
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[[Using GenomeView from the command-line]]
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[[Integration]]
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[[Session files]] -- [[Configuration options]]
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[[Communicating with GenomeView]]
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[[Programming with GenomeView]]
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[[Setting up authentication and encryption]]
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[[Making a plugin]]
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[[Integrating GenomeView as an editor]]
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[[Setting up a Genome Explorer repository]]
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</div>
 
</div>
 
</div>
 
</div>
  
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<div style="float:right;width:49%">
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{{Box-header|title=Developer manual}}
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These pages are aimed towards contributors to GenomeView and developers who work directly on the GenomeView code.
  
{{colbegin}}
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Currently most of this documentation lives on [https://sourceforge.net/p/genomeview/wiki/ Sourceforge].
{{lorem}}
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{{lorem}}
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[[Unit test example data files]]
{{colend}}
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</div>
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</div>
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<div style="clear:both;"></div>

Latest revision as of 16:16, 3 June 2014

Welcome to the GenomeView manual. These pages aim to answer any questions you may have as an end-user, a platform-user or as a contributing developer.

This documentation is open for anyone to contribute to, just click the edit-button near the top and you can help make this a better resource for everyone. Due to increasing vandalism we were forced to shutdown anonymous editing and account sign-up. If you like an account, please drop a note to support@genomeview.org.

Feel free to copy documentation from the old manual to here, there are still some pages that need to be transferred and we're happy with any help you can spare.


Getting started with GenomeView in 5 minutes

edit 

User manual

edit 

Getting help



edit 

Platform-user manual

edit 

Developer manual

These pages are aimed towards contributors to GenomeView and developers who work directly on the GenomeView code.

Currently most of this documentation lives on Sourceforge.

Unit test example data files