Bam2tdf

From GenomeView Manual

Revision as of 18:55, 21 October 2013 by 69.173.108.246 (talk) (Created page with "BAM2TDF is a command-line tool that converts BAM files to TDF (coverage) files. You can download the latest version from the GenomeView nightly builds: http://genomeview.org/...")

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BAM2TDF is a command-line tool that converts BAM files to TDF (coverage) files.

You can download the latest version from the GenomeView nightly builds: http://genomeview.org/jenkins/bam2tdf-nightly/

~$ java -jar bam2tdf.jar <location of your bam file>

Requirements: - Java 7+ - BAM file needs to be sorted and indexed

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