Difference between revisions of "Tdf"

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(Created page with "TDF is a binary file format that contains preprocessed summary information for display in a genome browser. This format is an alternative to wig and the bigwig formats and is...")
 
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TDF is a binary file format that contains preprocessed summary information for display in a genome browser.
 
  
This format is an alternative to wig and the bigwig formats and is typically used for data that has a value per chromosomal position, like for example coverage data.
 
 
You can create TDF files directly from BAM files or from wig files.
 
 
== Creating TDF files ==
 
* [[bam2tdf]]: convert read alignment to coverage plot
 
* [[wig2tdf]]: convert wig formatted data to tdf formatted data
 

Revision as of 17:02, 18 October 2013